STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AIY06342.1Muramoyltetrapeptide carboxypeptidase; COG1619. (307 aa)    
Predicted Functional Partners:
AIY06524.1
D-alanyl-D-alanine carboxypeptidase; COG2027.
 
  
 0.821
AIY06341.1
NLP/P60 family protein; COG0791.
 
  
 0.809
AIY06343.1
D-alanyl-aminopeptidase; COG2362.
 
    0.660
AIY06340.1
Hypothetical protein.
       0.502
AIY04447.1
Hypothetical protein; COG3876.
  
     0.407
AIY06344.1
D-alanyl-aminopeptidase; COG2362.
       0.403
Your Current Organism:
Planococcus sp. PAMC21323
NCBI taxonomy Id: 1526927
Other names: P. sp. PAMC 21323, Planococcus sp. PAMC 21323
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.