Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFN77242.1 | SFN88355.1 | SAMN04489757_101166 | SAMN04489757_103164 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Chemotaxis protein methyltransferase CheR. | 0.979 |
| SFN77242.1 | SFO15382.1 | SAMN04489757_101166 | SAMN04489757_11115 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.993 |
| SFN77242.1 | SFO21625.1 | SAMN04489757_101166 | SAMN04489757_11356 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
| SFN77242.1 | SFO21960.1 | SAMN04489757_101166 | SAMN04489757_11375 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.972 |
| SFN77242.1 | SFO23897.1 | SAMN04489757_101166 | SAMN04489757_11477 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.998 |
| SFN77242.1 | SFO31197.1 | SAMN04489757_101166 | SAMN04489757_11778 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.961 |
| SFN77242.1 | SFO45232.1 | SAMN04489757_101166 | SAMN04489757_12750 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Two-component system, chemotaxis family, response regulator CheV. | 0.996 |
| SFN77242.1 | SFO60525.1 | SAMN04489757_101166 | SAMN04489757_14613 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
| SFN77242.1 | SFO61680.1 | SAMN04489757_101166 | SAMN04489757_1487 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.995 |
| SFN77242.1 | SFO62354.1 | SAMN04489757_101166 | SAMN04489757_1498 | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.994 |
| SFN88355.1 | SFN77242.1 | SAMN04489757_103164 | SAMN04489757_101166 | Chemotaxis protein methyltransferase CheR. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.979 |
| SFN88355.1 | SFO15382.1 | SAMN04489757_103164 | SAMN04489757_11115 | Chemotaxis protein methyltransferase CheR. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.541 |
| SFN88355.1 | SFO21625.1 | SAMN04489757_103164 | SAMN04489757_11356 | Chemotaxis protein methyltransferase CheR. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.938 |
| SFN88355.1 | SFO21960.1 | SAMN04489757_103164 | SAMN04489757_11375 | Chemotaxis protein methyltransferase CheR. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.990 |
| SFN88355.1 | SFO23897.1 | SAMN04489757_103164 | SAMN04489757_11477 | Chemotaxis protein methyltransferase CheR. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.847 |
| SFN88355.1 | SFO45232.1 | SAMN04489757_103164 | SAMN04489757_12750 | Chemotaxis protein methyltransferase CheR. | Two-component system, chemotaxis family, response regulator CheV. | 0.991 |
| SFN88355.1 | SFO60525.1 | SAMN04489757_103164 | SAMN04489757_14613 | Chemotaxis protein methyltransferase CheR. | Diguanylate cyclase (GGDEF) domain-containing protein. | 0.959 |
| SFO15382.1 | SFN77242.1 | SAMN04489757_11115 | SAMN04489757_101166 | Diguanylate cyclase (GGDEF) domain-containing protein. | EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant). | 0.993 |
| SFO15382.1 | SFN88355.1 | SAMN04489757_11115 | SAMN04489757_103164 | Diguanylate cyclase (GGDEF) domain-containing protein. | Chemotaxis protein methyltransferase CheR. | 0.541 |
| SFO15382.1 | SFO21625.1 | SAMN04489757_11115 | SAMN04489757_11356 | Diguanylate cyclase (GGDEF) domain-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.997 |
page 1 of 5