STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN80544.1Kynurenine formamidase. (266 aa)    
Predicted Functional Partners:
SFN80562.1
Protein of unknown function.
 
     0.885
SFN80574.1
Succinyl-CoA synthetase, alpha subunit.
 
     0.883
SFN80597.1
Protein of unknown function.
 
     0.856
SFN80493.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 
     0.829
SFO62773.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.823
SFN92786.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.776
SFO60388.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.776
SFN80531.1
Carbon-monoxide dehydrogenase medium subunit.
 
     0.729
SFO23071.1
Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.
     
 0.677
SFO40325.1
NAD(P)-dependent iron-only hydrogenase catalytic subunit.
    
  0.677
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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