Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFN92398.1 | SFN92427.1 | SAMN04489757_104143 | SAMN04489757_104145 | Arginine decarboxylase. | Agmatinase; Belongs to the arginase family. | 0.993 |
| SFN92398.1 | SFN92458.1 | SAMN04489757_104143 | SAMN04489757_104147 | Arginine decarboxylase. | Carboxynorspermidine decarboxylase. | 0.777 |
| SFN92398.1 | SFO47286.1 | SAMN04489757_104143 | SAMN04489757_12943 | Arginine decarboxylase. | Hypothetical protein. | 0.424 |
| SFN92398.1 | nadE | SAMN04489757_104143 | SAMN04489757_10787 | Arginine decarboxylase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.516 |
| SFN92398.1 | speD | SAMN04489757_104143 | SAMN04489757_104142 | Arginine decarboxylase. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily. | 0.686 |
| SFN92398.1 | speE | SAMN04489757_104143 | SAMN04489757_104144 | Arginine decarboxylase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. | 0.996 |
| SFN92427.1 | SFN92398.1 | SAMN04489757_104145 | SAMN04489757_104143 | Agmatinase; Belongs to the arginase family. | Arginine decarboxylase. | 0.993 |
| SFN92427.1 | SFN92458.1 | SAMN04489757_104145 | SAMN04489757_104147 | Agmatinase; Belongs to the arginase family. | Carboxynorspermidine decarboxylase. | 0.792 |
| SFN92427.1 | SFO47286.1 | SAMN04489757_104145 | SAMN04489757_12943 | Agmatinase; Belongs to the arginase family. | Hypothetical protein. | 0.667 |
| SFN92427.1 | metK | SAMN04489757_104145 | SAMN04489757_12349 | Agmatinase; Belongs to the arginase family. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.410 |
| SFN92427.1 | nadE | SAMN04489757_104145 | SAMN04489757_10787 | Agmatinase; Belongs to the arginase family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.768 |
| SFN92427.1 | speD | SAMN04489757_104145 | SAMN04489757_104142 | Agmatinase; Belongs to the arginase family. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily. | 0.813 |
| SFN92427.1 | speE | SAMN04489757_104145 | SAMN04489757_104144 | Agmatinase; Belongs to the arginase family. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. | 0.993 |
| SFN92458.1 | SFN92398.1 | SAMN04489757_104147 | SAMN04489757_104143 | Carboxynorspermidine decarboxylase. | Arginine decarboxylase. | 0.777 |
| SFN92458.1 | SFN92427.1 | SAMN04489757_104147 | SAMN04489757_104145 | Carboxynorspermidine decarboxylase. | Agmatinase; Belongs to the arginase family. | 0.792 |
| SFN92458.1 | SFO47286.1 | SAMN04489757_104147 | SAMN04489757_12943 | Carboxynorspermidine decarboxylase. | Hypothetical protein. | 0.472 |
| SFN92458.1 | metK | SAMN04489757_104147 | SAMN04489757_12349 | Carboxynorspermidine decarboxylase. | Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme. | 0.423 |
| SFN92458.1 | nadE | SAMN04489757_104147 | SAMN04489757_10787 | Carboxynorspermidine decarboxylase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.597 |
| SFN92458.1 | speD | SAMN04489757_104147 | SAMN04489757_104142 | Carboxynorspermidine decarboxylase. | S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily. | 0.645 |
| SFN92458.1 | speE | SAMN04489757_104147 | SAMN04489757_104144 | Carboxynorspermidine decarboxylase. | Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family. | 0.957 |
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