STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFN95232.1Oligo-1,6-glucosidase. (672 aa)    
Predicted Functional Partners:
SFO11355.1
PTS system IIA component, Glc family.
  
 
 0.874
SFO40544.1
PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.
  
 
 0.874
SFO63957.1
PTS system, glucose subfamily, IIA component.
  
 
 0.874
SFO67589.1
PTS system, glucose subfamily, IIA component.
  
 
 0.874
SFN95247.1
Sugar (Glycoside-Pentoside-Hexuronide) transporter.
  
  
 0.784
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 
 0.775
SFN95342.1
Glycosidase.
 
0.771
SFN80041.1
Amino acid/polyamine/organocation transporter, APC superfamily.
   
 0.767
SFO29092.1
Alpha-galactosidase.
  
 
 0.719
SFO32869.1
4-alpha-glucanotransferase.
  
 
 0.719
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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