STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO00195.1N-acylneuraminate cytidylyltransferase. (231 aa)    
Predicted Functional Partners:
SFO00235.1
N-acetylneuraminate synthase.
 
 
 0.990
SFO00214.1
GDP/UDP-N,N'-diacetylbacillosamine 2-epimerase (hydrolysing).
  
 0.975
SFO00282.1
CBS domain-containing protein.
  
 0.946
SFO00328.1
dTDP-glucose 4,6-dehydratase.
 
  
 0.882
SFO00262.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
 
     0.859
SFO00348.1
Uncharacterized conserved protein.
 
    0.841
SFO00312.1
Aminotransferase, LLPSF_NHT_00031 family; Belongs to the DegT/DnrJ/EryC1 family.
 
  
 0.766
hisF
Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.
      0.666
SFO30738.1
UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
  
  
 0.562
SFO16911.1
D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
   
  0.549
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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