STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO05241.1Hypothetical protein. (278 aa)    
Predicted Functional Partners:
SFO05225.1
Hypothetical protein.
     0.973
SFO05205.1
Hypothetical protein.
 
     0.931
SFO52050.1
Tetratricopeptide repeat-containing protein.
 
     0.787
SFO46286.1
Hypothetical protein.
  
     0.775
SFO03246.1
Hypothetical protein.
  
     0.774
SFO21064.1
Cell division protein FtsL.
  
     0.774
SFO06371.1
Hypothetical protein.
  
     0.773
SFO03264.1
Hypothetical protein.
  
     0.772
SFN92285.1
Protein of unknown function.
  
     0.771
SFO41720.1
Hypothetical protein.
  
     0.769
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.