STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO10655.1N-acetylmuramoyl-L-alanine amidase. (320 aa)    
Predicted Functional Partners:
SFO52147.1
Stage V sporulation protein AD.
  
  
 0.654
SFO52132.1
Stage V sporulation protein AC.
  
  
 0.644
gpr
Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.
  
    0.623
SFO06402.1
Putative sporulation protein YyaC.
  
     0.620
SFO44566.1
Hypothetical protein.
  
     0.591
SFO46102.1
Stage III sporulation protein D.
  
  
 0.561
SFO03246.1
Hypothetical protein.
  
     0.556
SFO21064.1
Cell division protein FtsL.
  
     0.540
SFN82442.1
Beta-N-acetylglucosaminidase.
  
     0.537
SFO43459.1
Transcriptional regulator, AbrB family.
  
   
 0.529
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.