STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO15491.1Amino acid ABC transporter ATP-binding protein, PAAT family. (240 aa)    
Predicted Functional Partners:
SFO15507.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.999
SFO67146.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.994
SFO23853.1
Amino acid ABC transporter membrane protein, PAAT family.
 0.973
SFO46043.1
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.970
SFO15521.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
 
 0.962
SFO46057.1
Amino acid ABC transporter membrane protein 1, PAAT family.
 0.957
SFO46020.1
Amino acid ABC transporter substrate-binding protein, PAAT family.
 0.932
SFO08121.1
ATP-binding cassette, subfamily B, multidrug efflux pump.
 
     
0.897
SFN99197.1
ATP-binding cassette, subfamily B.
 
     
0.895
SFN98650.1
ATP-binding cassette, subfamily B.
 
     
0.891
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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