STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO19838.1Carbon-monoxide dehydrogenase small subunit. (155 aa)    
Predicted Functional Partners:
SFO19850.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.998
SFN80531.1
Carbon-monoxide dehydrogenase medium subunit.
 0.995
SFO12759.1
Xanthine dehydrogenase molybdenum-binding subunit.
 0.993
SFN80493.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.987
SFO07137.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.981
SFO19819.1
CO or xanthine dehydrogenase, FAD-binding subunit.
 
 0.981
SFN86097.1
CO or xanthine dehydrogenase, Mo-binding subunit.
 0.977
SFO12774.1
Xanthine dehydrogenase FAD-binding subunit.
 0.974
SFO07177.1
CO or xanthine dehydrogenase, FAD-binding subunit.
 0.953
SFN86077.1
Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain.
 0.946
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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