STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO22806.1Fructuronate reductase. (535 aa)    
Predicted Functional Partners:
SFN85391.1
PTS system, mannitol-specific IIC component.
  
 
 0.993
SFN85426.1
PTS system, mannitol-specific IIA component.
  
 
 0.993
uxuA
D-mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
 
 0.970
uxaC-2
Glucuronate isomerase.
 
 
 0.879
SFN85411.1
Mannitol operon transcriptional antiterminator.
  
 
 0.869
SFO34518.1
Transcriptional antiterminator.
  
 
 0.869
uxaC
Glucuronate isomerase.
 
 
 0.867
SFN77806.1
Fructokinase.
    
 0.751
SFO10859.1
(R,R)-butanediol dehydrogenase / meso-butanediol dehydrogenase / diacetyl reductase.
    
 0.709
SFO22191.1
DNA-binding transcriptional regulator, GntR family.
   
 0.685
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.