STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO29064.1Hypothetical protein. (313 aa)    
Predicted Functional Partners:
SFO55594.1
Flagellar motor switch protein FliN/FliY.
   
 
 0.923
SFO27589.1
Non-ribosomal peptide synthase domain TIGR01720.
 
  
 0.810
cinA
Nicotinamide-nucleotide amidase; Belongs to the CinA family.
     
 0.781
SFO29044.1
Mannose-6-phosphate isomerase, type 1.
       0.773
SFO28999.1
ABC-type glycerol-3-phosphate transport system, substrate-binding protein.
 
     0.754
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
    
  0.746
SFO28981.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  
     0.701
SFO28933.1
Mannobiose 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).
 
     0.646
SFO13269.1
Hypothetical protein.
  
 0.609
SFO22817.1
Hypothetical protein.
  
 0.609
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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