STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO32899.1Transcriptional regulator, LacI family. (331 aa)    
Predicted Functional Partners:
SFO37914.1
LacI family transcriptional regulator.
  
     0.775
SFO59542.1
Transcriptional regulator, LacI family.
  
     0.775
SFO29032.1
Transcriptional regulator, LacI family.
  
     0.773
SFO11355.1
PTS system IIA component, Glc family.
    
 0.723
SFO40544.1
PTS system beta-glucoside-specific IIA component, Glc family /PTS system beta-glucoside-specific IIB component, Glc family /PTS system beta-glucoside-specific IIC component, Glc family.
    
 0.723
SFO63957.1
PTS system, glucose subfamily, IIA component.
    
 0.723
SFO67589.1
PTS system, glucose subfamily, IIA component.
    
 0.723
SFN90689.1
GntR family transcriptional regulator, arabinose operon transcriptional repressor.
  
     0.708
SFO32885.1
Glycosidase; Belongs to the glycosyl hydrolase 13 family.
  
 
  0.579
SFN77806.1
Fructokinase.
  
 
 0.574
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.