STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO32311.1SCP-2 sterol transfer family protein. (332 aa)    
Predicted Functional Partners:
SFN92786.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.936
SFO60388.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
  
 
 0.928
SFO62773.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.926
SFO32326.1
Rhomboid protease GluP.
       0.821
SFN80463.1
Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
   
 
 0.735
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
       0.576
SFO44745.1
Phosphate acetyltransferase.
    
 0.501
SFO45101.1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
  0.493
SFO57813.1
acetyl-CoA carboxylase biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
     
 0.484
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.475
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.