STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO38886.1Nitrogenase molybdenum-iron protein beta chain. (444 aa)    
Predicted Functional Partners:
SFO38902.1
Nitrogenase molybdenum-iron protein alpha chain.
 
0.998
nifH
Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.
 
 0.997
SFO38836.1
Nitrogen fixation protein NifB.
  
 0.948
SFO38939.1
Dinitrogenase iron-molybdenum cofactor.
 
  
 0.918
SFO38852.1
Predicted Fe-Mo cluster-binding protein, NifX family.
 
  
 0.904
SFO18230.1
Pyridine nucleotide-disulphide oxidoreductase.
   
 
 0.826
SFO38986.1
NitT/TauT family transport system substrate-binding protein.
 
    0.826
SFN80976.1
Glutamine synthetase.
   
 
 0.823
hcp
Hydroxylamine reductase; Catalyzes the reduction of hydroxylamine to form NH(3) and H(2)O.
     
 0.805
SFO38956.1
NitT/TauT family transport system permease protein.
 
    0.778
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.