STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO40859.1Ribosomal-protein-alanine N-acetyltransferase. (182 aa)    
Predicted Functional Partners:
SFO62773.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.862
SFO60388.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.849
SFO39715.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
 
      0.847
SFO27589.1
Non-ribosomal peptide synthase domain TIGR01720.
 
 
 0.774
SFN92786.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.740
SFO17179.1
Chorismate mutase / prephenate dehydratase.
    
  0.685
SFO27652.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.624
SFN85998.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.602
SFN87493.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.573
SFO40866.1
Transposase and inactivated derivatives.
       0.553
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.