STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO48917.1Carbohydrate ABC transporter membrane protein 1, CUT1 family. (291 aa)    
Predicted Functional Partners:
SFO48903.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
  0.974
SFO48930.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
  0.946
SFO60128.1
Raffinose/stachyose/melibiose transport system substrate-binding protein.
  
 0.921
SFO01594.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 
 0.913
SFO60148.1
Raffinose/stachyose/melibiose transport system permease protein.
 
  0.893
SFO28965.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.877
SFN75998.1
Multiple sugar transport system permease protein.
 
  0.866
SFO60012.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.863
SFN95778.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.858
SFO16843.1
Carbohydrate ABC transporter membrane protein 2, CUT1 family.
 
  0.851
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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