STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO49393.1Trypsin-like peptidase domain-containing protein. (468 aa)    
Predicted Functional Partners:
SFO17159.1
Serine protease Do.
  
  
 
0.819
SFO52286.1
Ig-like domain (group 2).
  
  
  0.819
SFO03576.1
Serine protease Do.
  
  
 
0.817
SFO49381.1
3'-5' exoribonuclease.
 
     0.741
SFO18678.1
3-hydroxybutyryl-CoA dehydratase.
    
  0.713
SFO27589.1
Non-ribosomal peptide synthase domain TIGR01720.
  
 
 0.713
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.632
glpK-2
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
   
 0.632
SFO18616.1
butyryl-CoA dehydrogenase.
    
  0.579
SFN99034.1
Glycine/D-amino acid oxidase.
  
 0.576
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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