Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFO55534.1 | SFO55572.1 | SAMN04489757_13919 | SAMN04489757_13922 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Flagellar protein FliO/FliZ. | 0.944 |
SFO55534.1 | SFO55594.1 | SAMN04489757_13919 | SAMN04489757_13924 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Flagellar motor switch protein FliN/FliY. | 0.998 |
SFO55534.1 | SFO55607.1 | SAMN04489757_13919 | SAMN04489757_13925 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Flagellar motor switch protein FliM. | 0.985 |
SFO55534.1 | SFO55644.1 | SAMN04489757_13919 | SAMN04489757_13928 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Chemotaxis protein MotA. | 0.959 |
SFO55534.1 | SFO55796.1 | SAMN04489757_13919 | SAMN04489757_13939 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Flagellar M-ring protein FliF. | 0.976 |
SFO55534.1 | SFO55828.1 | SAMN04489757_13919 | SAMN04489757_13941 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.971 |
SFO55534.1 | SFO55843.1 | SAMN04489757_13919 | SAMN04489757_13942 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.987 |
SFO55534.1 | flhB | SAMN04489757_13919 | SAMN04489757_13918 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.999 |
SFO55534.1 | fliP | SAMN04489757_13919 | SAMN04489757_13921 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.999 |
SFO55534.1 | fliQ | SAMN04489757_13919 | SAMN04489757_13920 | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. | 0.999 |
SFO55572.1 | SFO55534.1 | SAMN04489757_13922 | SAMN04489757_13919 | Flagellar protein FliO/FliZ. | Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family. | 0.944 |
SFO55572.1 | SFO55594.1 | SAMN04489757_13922 | SAMN04489757_13924 | Flagellar protein FliO/FliZ. | Flagellar motor switch protein FliN/FliY. | 0.999 |
SFO55572.1 | SFO55607.1 | SAMN04489757_13922 | SAMN04489757_13925 | Flagellar protein FliO/FliZ. | Flagellar motor switch protein FliM. | 0.990 |
SFO55572.1 | SFO55644.1 | SAMN04489757_13922 | SAMN04489757_13928 | Flagellar protein FliO/FliZ. | Chemotaxis protein MotA. | 0.793 |
SFO55572.1 | SFO55796.1 | SAMN04489757_13922 | SAMN04489757_13939 | Flagellar protein FliO/FliZ. | Flagellar M-ring protein FliF. | 0.911 |
SFO55572.1 | SFO55828.1 | SAMN04489757_13922 | SAMN04489757_13941 | Flagellar protein FliO/FliZ. | Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family. | 0.909 |
SFO55572.1 | SFO55843.1 | SAMN04489757_13922 | SAMN04489757_13942 | Flagellar protein FliO/FliZ. | Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body. | 0.909 |
SFO55572.1 | flhB | SAMN04489757_13922 | SAMN04489757_13918 | Flagellar protein FliO/FliZ. | Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family. | 0.978 |
SFO55572.1 | fliP | SAMN04489757_13922 | SAMN04489757_13921 | Flagellar protein FliO/FliZ. | Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family. | 0.994 |
SFO55572.1 | fliQ | SAMN04489757_13922 | SAMN04489757_13920 | Flagellar protein FliO/FliZ. | Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family. | 0.983 |
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