STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO57015.1Leader peptidase (prepilin peptidase) / N-methyltransferase. (253 aa)    
Predicted Functional Partners:
SFO56985.1
Type IV pilus assembly protein PilC.
 
  
 0.959
SFO56961.1
Type IV pilus assembly protein PilB.
 
 
 0.958
SFO57028.1
Type IV pilus assembly protein PilM.
 
  
 0.951
SFO56973.1
Twitching motility protein PilT.
 
   
 0.916
SFO56999.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
 
  
 0.902
SFO57044.1
Hypothetical protein.
     
 0.864
SFO57059.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
  
 0.863
SFO20714.1
DNA processing protein.
  
  
 0.822
SFO57098.1
Prepilin-type N-terminal cleavage/methylation domain-containing protein.
  
  
 0.796
SFO66850.1
Competence protein ComEA.
   
  
 0.766
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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