Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SFO23027.1 | SFO63745.1 | SAMN04489757_11418 | SAMN04489757_15222 | Uncharacterized protein, PH0010 family/AmmeMemoRadiSam system protein A/AmmeMemoRadiSam system protein B. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.464 |
| SFO42589.1 | SFO63745.1 | SAMN04489757_12518 | SAMN04489757_15222 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.517 |
| SFO43753.1 | SFO63745.1 | SAMN04489757_12622 | SAMN04489757_15222 | DnaD and phage-associated domain-containing protein. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.429 |
| SFO59365.1 | SFO63745.1 | SAMN04489757_14411 | SAMN04489757_15222 | Protein of unknown function. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.433 |
| SFO63735.1 | SFO63745.1 | SAMN04489757_15221 | SAMN04489757_15222 | Hypothetical protein. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.416 |
| SFO63745.1 | SFO23027.1 | SAMN04489757_15222 | SAMN04489757_11418 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | Uncharacterized protein, PH0010 family/AmmeMemoRadiSam system protein A/AmmeMemoRadiSam system protein B. | 0.464 |
| SFO63745.1 | SFO42589.1 | SAMN04489757_15222 | SAMN04489757_12518 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.517 |
| SFO63745.1 | SFO43753.1 | SAMN04489757_15222 | SAMN04489757_12622 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | DnaD and phage-associated domain-containing protein. | 0.429 |
| SFO63745.1 | SFO59365.1 | SAMN04489757_15222 | SAMN04489757_14411 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | Protein of unknown function. | 0.433 |
| SFO63745.1 | SFO63735.1 | SAMN04489757_15222 | SAMN04489757_15221 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | Hypothetical protein. | 0.416 |
| SFO63745.1 | SFO63753.1 | SAMN04489757_15222 | SAMN04489757_15223 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | Hydrogenase maturation factor. | 0.612 |
| SFO63745.1 | SFO63766.1 | SAMN04489757_15222 | SAMN04489757_15224 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | DNA-binding transcriptional regulator, Lrp family. | 0.438 |
| SFO63745.1 | SFO66941.1 | SAMN04489757_15222 | SAMN04489757_16311 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | Cell envelope-related function transcriptional attenuator common domain-containing protein. | 0.521 |
| SFO63745.1 | gltX | SAMN04489757_15222 | SAMN04489757_105136 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily. | 0.427 |
| SFO63745.1 | minE | SAMN04489757_15222 | SAMN04489757_10389 | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell. | 0.471 |
| SFO63753.1 | SFO63745.1 | SAMN04489757_15223 | SAMN04489757_15222 | Hydrogenase maturation factor. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.612 |
| SFO63753.1 | SFO63766.1 | SAMN04489757_15223 | SAMN04489757_15224 | Hydrogenase maturation factor. | DNA-binding transcriptional regulator, Lrp family. | 0.726 |
| SFO63766.1 | SFO63745.1 | SAMN04489757_15224 | SAMN04489757_15222 | DNA-binding transcriptional regulator, Lrp family. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.438 |
| SFO63766.1 | SFO63753.1 | SAMN04489757_15224 | SAMN04489757_15223 | DNA-binding transcriptional regulator, Lrp family. | Hydrogenase maturation factor. | 0.726 |
| SFO66941.1 | SFO63745.1 | SAMN04489757_16311 | SAMN04489757_15222 | Cell envelope-related function transcriptional attenuator common domain-containing protein. | Vancomycin resistance protein YoaR, contains peptidoglycan-binding and VanW domains. | 0.521 |
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