STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFO69102.1Transposase IS200 like. (63 aa)    
Predicted Functional Partners:
SFN83328.1
Transposase IS200 like.
 
     0.901
SFO63180.1
Transposase IS200 like.
 
     0.901
SFN78308.1
Transposase IS200 like.
 
     0.811
SFN85135.1
Transposase IS200 like.
 
     0.811
SFO62773.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.781
SFO60388.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.779
SFN92786.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.778
SFO58150.1
Transposase IS200 like.
 
      0.743
SFO27589.1
Non-ribosomal peptide synthase domain TIGR01720.
   
 
 0.710
SFO42396.1
Transposase IS200 like.
 
     0.665
Your Current Organism:
Anaerocolumna aminovalerica
NCBI taxonomy Id: 1527
Other names: A. aminovalerica, ATCC 13725, CIP 104304, Clostridium aminovalericum, JCM 11016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.