STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDM14032.1DNA-binding transcriptional regulator, MarR family. (166 aa)    
Predicted Functional Partners:
SDM14012.1
Membrane fusion protein, multidrug efflux system.
 
   
 0.646
SDM14047.1
Mg2+ and Co2+ transporter CorA.
 
     0.645
SDM13994.1
MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.
 
   
 0.611
SDM14067.1
Porphobilinogen synthase; Belongs to the ALAD family.
     
 0.520
SDM32608.1
Nitroreductase.
  
 
 0.501
SDM45557.1
Sulfate adenylyltransferase subunit 2.
  
  
 0.485
SDM49554.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
     
 0.476
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
     
 0.441
SDM40189.1
Signal transduction histidine kinase.
  
  
 0.429
SDM45529.1
Phosphoadenylylsulfate reductase (thioredoxin).
     
 0.419
Your Current Organism:
Oryzisolibacter propanilivorax
NCBI taxonomy Id: 1527607
Other names: Alicycliphilus sp. EPL6, Alicycliphilus sp. LMG 28427, CECT 8927, LMG 28427, LMG:28427, O. propanilivorax, Oryzisolibacter propanilivorax Vaz-Moreira et al. 2017, strain EPL6
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