STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
virB8_2Type IV secretion system protein virB8. (229 aa)    
Predicted Functional Partners:
virB8_1
Type IV secretion system protein virB8.
     
 
0.900
virB9_2
Type IV secretion system protein virB9.
  
  
 0.839
AIL65798.1
Type IV secretion system protein VirB3.
  
 
 0.804
virB4_3
Type IV secretion system protein virB4.
  
 
 0.738
virB4_1
Type IV secretion system protein virB4; Conjugal transfer protein TrbE.
  
 
 0.724
virB4_2
Type IV secretion system protein virB4.
  
 
 0.719
virB11
Type IV secretion system protein virB11; Part of the Type IV secretion system. Belongs to the GSP E family.
  
  
 0.637
AIL64749.1
Conjugal transfer protein TrbI; Type IV secretion system protein virB10.
  
  
 0.625
virB10
Type IV secretion system protein virB10.
  
  
 0.625
AIL64748.1
Conjugal transfer protein TrbG; Type IV secretion system protein virB9.
  
  
 0.604
Your Current Organism:
Rickettsiales bacterium Ac37b
NCBI taxonomy Id: 1528098
Other names: R. bacterium Ac37b
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