Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF49336.1 | SFF74957.1 | SAMN04487885_10195 | SAMN04487885_10923 | Phosphoglucomutase. | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | 0.897 |
SFF49336.1 | SFF86588.1 | SAMN04487885_10195 | SAMN04487885_11325 | Phosphoglucomutase. | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | 0.946 |
SFF49336.1 | SFF86650.1 | SAMN04487885_10195 | SAMN04487885_11328 | Phosphoglucomutase. | Glucose-1-phosphate adenylyltransferase. | 0.963 |
SFF49336.1 | SFF99433.1 | SAMN04487885_10195 | SAMN04487885_11944 | Phosphoglucomutase. | UDP-glucose pyrophosphorylase. | 0.896 |
SFF49336.1 | SFG04233.1 | SAMN04487885_10195 | SAMN04487885_12247 | Phosphoglucomutase. | Glucokinase. | 0.902 |
SFF49336.1 | deoC | SAMN04487885_10195 | SAMN04487885_105125 | Phosphoglucomutase. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.950 |
SFF49336.1 | galU | SAMN04487885_10195 | SAMN04487885_101100 | Phosphoglucomutase. | UTP--glucose-1-phosphate uridylyltransferase. | 0.952 |
SFF49336.1 | glgC | SAMN04487885_10195 | SAMN04487885_11327 | Phosphoglucomutase. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.949 |
SFF49336.1 | pgi | SAMN04487885_10195 | SAMN04487885_10978 | Phosphoglucomutase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.927 |
SFF49336.1 | prs | SAMN04487885_10195 | SAMN04487885_12111 | Phosphoglucomutase. | Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily. | 0.897 |
SFF74957.1 | SFF49336.1 | SAMN04487885_10923 | SAMN04487885_10195 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Phosphoglucomutase. | 0.897 |
SFF74957.1 | deoC | SAMN04487885_10923 | SAMN04487885_105125 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. | 0.462 |
SFF74957.1 | pgi | SAMN04487885_10923 | SAMN04487885_10978 | Ribose-phosphate pyrophosphokinase; Belongs to the ribose-phosphate pyrophosphokinase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.643 |
SFF86588.1 | SFF49336.1 | SAMN04487885_11325 | SAMN04487885_10195 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Phosphoglucomutase. | 0.946 |
SFF86588.1 | SFF86650.1 | SAMN04487885_11325 | SAMN04487885_11328 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glucose-1-phosphate adenylyltransferase. | 0.998 |
SFF86588.1 | SFF99433.1 | SAMN04487885_11325 | SAMN04487885_11944 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | UDP-glucose pyrophosphorylase. | 0.789 |
SFF86588.1 | galU | SAMN04487885_11325 | SAMN04487885_101100 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | UTP--glucose-1-phosphate uridylyltransferase. | 0.789 |
SFF86588.1 | glgC | SAMN04487885_11325 | SAMN04487885_11327 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. | 0.998 |
SFF86588.1 | pgi | SAMN04487885_11325 | SAMN04487885_10978 | Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.752 |
SFF86650.1 | SFF49336.1 | SAMN04487885_11328 | SAMN04487885_10195 | Glucose-1-phosphate adenylyltransferase. | Phosphoglucomutase. | 0.963 |
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