Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF61132.1 | SFF64116.1 | SAMN04487885_10469 | SAMN04487885_10534 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Transketolase. | 0.850 |
SFF61132.1 | SFF64252.1 | SAMN04487885_10469 | SAMN04487885_10544 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.962 |
SFF61132.1 | SFG17685.1 | SAMN04487885_10469 | SAMN04487885_13114 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.984 |
SFF61132.1 | eno | SAMN04487885_10469 | SAMN04487885_10540 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.999 |
SFF61132.1 | gpmI | SAMN04487885_10469 | SAMN04487885_10541 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.840 |
SFF61132.1 | nifJ | SAMN04487885_10469 | SAMN04487885_10258 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.982 |
SFF61132.1 | pfkA | SAMN04487885_10469 | SAMN04487885_10468 | Pyruvate kinase; Belongs to the pyruvate kinase family. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.998 |
SFF61132.1 | pgi | SAMN04487885_10469 | SAMN04487885_10978 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.999 |
SFF61132.1 | tal | SAMN04487885_10469 | SAMN04487885_10529 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.922 |
SFF61132.1 | tpiA | SAMN04487885_10469 | SAMN04487885_10542 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.924 |
SFF64116.1 | SFF61132.1 | SAMN04487885_10534 | SAMN04487885_10469 | Transketolase. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.850 |
SFF64116.1 | SFF64252.1 | SAMN04487885_10534 | SAMN04487885_10544 | Transketolase. | Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.881 |
SFF64116.1 | SFG17685.1 | SAMN04487885_10534 | SAMN04487885_13114 | Transketolase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.900 |
SFF64116.1 | eno | SAMN04487885_10534 | SAMN04487885_10540 | Transketolase. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.876 |
SFF64116.1 | gpmI | SAMN04487885_10534 | SAMN04487885_10541 | Transketolase. | Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. | 0.876 |
SFF64116.1 | nifJ | SAMN04487885_10534 | SAMN04487885_10258 | Transketolase. | Pyruvate-ferredoxin/flavodoxin oxidoreductase. | 0.896 |
SFF64116.1 | pfkA | SAMN04487885_10534 | SAMN04487885_10468 | Transketolase. | 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. | 0.866 |
SFF64116.1 | pgi | SAMN04487885_10534 | SAMN04487885_10978 | Transketolase. | Glucose-6-phosphate isomerase; Belongs to the GPI family. | 0.871 |
SFF64116.1 | tal | SAMN04487885_10534 | SAMN04487885_10529 | Transketolase. | Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily. | 0.901 |
SFF64116.1 | tpiA | SAMN04487885_10534 | SAMN04487885_10542 | Transketolase. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.856 |
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