STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFF74718.1Cadherin-like beta sandwich domain-containing protein. (652 aa)    
Predicted Functional Partners:
SFF74732.1
Hypothetical protein.
     0.949
SFF74779.1
Protein of unknown function DUF58.
 
     0.930
SFF74823.1
Energy-coupling factor transport system permease protein.
 
     0.910
SFF74835.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.909
SFF74849.1
Energy-coupling factor transport system substrate-specific component.
 
     0.903
SFF74794.1
Transglutaminase-like superfamily protein.
 
     0.891
SFF74708.1
Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat.
     0.862
SFF74809.1
Protein of unknown function.
 
    
0.793
SFF58377.1
LPXTG-motif cell wall anchor domain-containing protein.
 
     0.779
SFF74770.1
MoxR-like ATPase.
       0.773
Your Current Organism:
Clostridium cadaveris
NCBI taxonomy Id: 1529
Other names: ATCC 25783, Bacillus cadaveris, C. cadaveris, CCUG 24035, CIP 104314, Plectridium cadaveris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.