STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG10844.1Protein of unknown function. (118 aa)    
Predicted Functional Partners:
nifJ
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
  0.842
SFF97856.1
PTS fructose transporter subunit IIC; PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
     
 0.830
SFG17685.1
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
   
  0.710
SFG10872.1
Hypothetical protein.
       0.705
SFG10892.1
Transcriptional regulator, PadR family.
       0.705
cinA
Competence/damage-inducible protein cinA; Belongs to the CinA family.
     
 0.645
SFF92945.1
Methionine synthase (B12-dependent).
    
 0.600
SFF98723.1
N-terminal domain of peptidoglycan hydrolase CwlO-containing protein.
  
  
 0.563
guaB
IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.
   
 
  0.562
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
    
 0.556
Your Current Organism:
Clostridium cadaveris
NCBI taxonomy Id: 1529
Other names: ATCC 25783, Bacillus cadaveris, C. cadaveris, CCUG 24035, CIP 104314, Plectridium cadaveris
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.