STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG12532.1NADH-FMN oxidoreductase RutF, flavin reductase (DIM6/NTAB) family. (202 aa)    
Predicted Functional Partners:
SFG12512.1
D-alanyl-D-alanine carboxypeptidase; Belongs to the peptidase S11 family.
     
 0.783
SFF55440.1
Nitroreductase.
 
 
 0.607
SFF96921.1
4-hydroxybutyryl-CoA dehydratase / vinylacetyl-CoA-Delta-isomerase.
  
 
 0.586
nifJ
Pyruvate-ferredoxin/flavodoxin oxidoreductase.
    
 0.583
SFF72547.1
SagB-type dehydrogenase domain-containing protein.
  
 
 0.546
SFF70558.1
Mobilisation protein (MobC).
  
 
 0.535
SFG29990.1
Mobilisation protein (MobC).
  
 
 0.535
SFF50751.1
Riboflavin kinase / FMN adenylyltransferase; Belongs to the ribF family.
    
  0.517
SFF48492.1
NAD(P)H-flavin reductase.
 
 
  0.496
ribBA
3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
  
 0.495
Your Current Organism:
Clostridium cadaveris
NCBI taxonomy Id: 1529
Other names: ATCC 25783, Bacillus cadaveris, C. cadaveris, CCUG 24035, CIP 104314, Plectridium cadaveris
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