Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFF73283.1 | SFG24317.1 | SAMN04487885_10896 | SAMN04487885_13719 | Hypothetical protein. | Polyhydroxyalkanoate synthesis regulator phasin. | 0.430 |
SFF91280.1 | SFF91298.1 | SAMN04487885_11524 | SAMN04487885_11525 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.959 |
SFF91280.1 | SFG24317.1 | SAMN04487885_11524 | SAMN04487885_13719 | ABC-2 type transport system permease protein. | Polyhydroxyalkanoate synthesis regulator phasin. | 0.406 |
SFF91298.1 | SFF91280.1 | SAMN04487885_11525 | SAMN04487885_11524 | ABC-2 type transport system permease protein. | ABC-2 type transport system permease protein. | 0.959 |
SFF91298.1 | SFG24317.1 | SAMN04487885_11525 | SAMN04487885_13719 | ABC-2 type transport system permease protein. | Polyhydroxyalkanoate synthesis regulator phasin. | 0.403 |
SFF99053.1 | SFG24317.1 | SAMN04487885_11927 | SAMN04487885_13719 | Membrane protein involved in the export of O-antigen and teichoic acid. | Polyhydroxyalkanoate synthesis regulator phasin. | 0.445 |
SFG17547.1 | SFG24317.1 | SAMN04487885_1318 | SAMN04487885_13719 | Penicillin-binding protein. | Polyhydroxyalkanoate synthesis regulator phasin. | 0.404 |
SFG24293.1 | SFG24317.1 | SAMN04487885_13718 | SAMN04487885_13719 | Ubiquinone biosynthesis protein. | Polyhydroxyalkanoate synthesis regulator phasin. | 0.900 |
SFG24293.1 | secD | SAMN04487885_13718 | SAMN04487885_11634 | Ubiquinone biosynthesis protein. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.472 |
SFG24317.1 | SFF73283.1 | SAMN04487885_13719 | SAMN04487885_10896 | Polyhydroxyalkanoate synthesis regulator phasin. | Hypothetical protein. | 0.430 |
SFG24317.1 | SFF91280.1 | SAMN04487885_13719 | SAMN04487885_11524 | Polyhydroxyalkanoate synthesis regulator phasin. | ABC-2 type transport system permease protein. | 0.406 |
SFG24317.1 | SFF91298.1 | SAMN04487885_13719 | SAMN04487885_11525 | Polyhydroxyalkanoate synthesis regulator phasin. | ABC-2 type transport system permease protein. | 0.403 |
SFG24317.1 | SFF99053.1 | SAMN04487885_13719 | SAMN04487885_11927 | Polyhydroxyalkanoate synthesis regulator phasin. | Membrane protein involved in the export of O-antigen and teichoic acid. | 0.445 |
SFG24317.1 | SFG17547.1 | SAMN04487885_13719 | SAMN04487885_1318 | Polyhydroxyalkanoate synthesis regulator phasin. | Penicillin-binding protein. | 0.404 |
SFG24317.1 | SFG24293.1 | SAMN04487885_13719 | SAMN04487885_13718 | Polyhydroxyalkanoate synthesis regulator phasin. | Ubiquinone biosynthesis protein. | 0.900 |
SFG24317.1 | secD | SAMN04487885_13719 | SAMN04487885_11634 | Polyhydroxyalkanoate synthesis regulator phasin. | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.475 |
secD | SFG24293.1 | SAMN04487885_11634 | SAMN04487885_13718 | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Ubiquinone biosynthesis protein. | 0.472 |
secD | SFG24317.1 | SAMN04487885_11634 | SAMN04487885_13719 | SecD/SecF fusion protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Polyhydroxyalkanoate synthesis regulator phasin. | 0.475 |