STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC12024.1Conjugal transfer protein TraG; Derived by automated computational analysis using gene prediction method: Protein Homology. (613 aa)    
Predicted Functional Partners:
AJC12021.1
Conjugal transfer protein TraC; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.908
AJC12018.1
TrbL/VirB6 plasmid conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.880
AJC12020.1
Hydrolase Nlp/P60; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.821
AJC12025.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.783
AJC12009.1
Plasmid stablization protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.758
AJC12016.1
Collagen-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.719
AJC11701.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.691
AJC12026.1
Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.681
AJC12400.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.668
AJC12014.1
Tetracycline resistance protein tetM; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.611
Your Current Organism:
Coriobacteriaceae bacterium 6813
NCBI taxonomy Id: 1531429
Other names: C. bacterium 68-1-3, Coriobacteriaceae bacterium 68-1-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.