STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJC12054.1Sulfur relay protein TusE; Derived by automated computational analysis using gene prediction method: Protein Homology. (104 aa)    
Predicted Functional Partners:
AJC12063.1
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.856
AJC12064.1
Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.853
AJC12067.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 
 0.772
AJC12057.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.721
AJC12055.1
Menaquinol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.671
cobB
Hypothetical protein; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of hydrogenobyrinate, using either L- glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.
 
   
 0.668
AJC12056.1
4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.642
AJC12058.1
Menaquinol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.613
AJC12660.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.562
AJC12714.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.562
Your Current Organism:
Coriobacteriaceae bacterium 6813
NCBI taxonomy Id: 1531429
Other names: C. bacterium 68-1-3, Coriobacteriaceae bacterium 68-1-3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.