STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JL57_32360Permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (343 aa)    
Predicted Functional Partners:
JL57_06660
ATP synthase F0 subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.788
JL57_31090
Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.580
JL57_02940
N5-carboxyaminoimidazole ribonucleotide mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.538
JL57_03060
N5-carboxyaminoimidazole ribonucleotide mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.538
JL57_07650
N5-carboxyaminoimidazole ribonucleotide mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.538
JL57_03065
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.529
JL57_06315
Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.529
JL57_26240
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.529
JL57_32355
alanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.510
JL57_32350
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.500
Your Current Organism:
Desulfosporosinus sp. BICA19
NCBI taxonomy Id: 1531958
Other names: D. sp. BICA1-9, Desulfosporosinus sp. BICA1-9
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.