STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VHEMI04847Uncharacterized protein. (551 aa)    
Predicted Functional Partners:
VHEMI06728
Putative Eukaryotic peptide chain release factor GTP-binding subunit.
    
 
 0.622
VHEMI05191
Putative UV excision repair protein rhp23.
    
 0.587
VHEMI04065
Putative Prion formation protein.
      
 0.523
Your Current Organism:
Torrubiella hemipterigena
NCBI taxonomy Id: 1531966
Other names: T. hemipterigena, Verticillium hemipterigenum
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