STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALJ06998.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (170 aa)    
Predicted Functional Partners:
ALJ09877.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.993
ALJ06997.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.977
ALJ09876.1
Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
 
    0.949
ALJ08466.1
NAD+ synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.910
ALJ06996.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.830
ALJ09419.1
Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.538
ALJ07000.1
Fe(II)-dependent oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.483
ALJ06999.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.478
ALJ07001.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.452
ALJ07061.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.439
Your Current Organism:
Brevundimonas sp. DS20
NCBI taxonomy Id: 1532555
Other names: B. sp. DS20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.