STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE32101.1PTS system, ascorbate-specific IIB component. (95 aa)    
Predicted Functional Partners:
SHE32131.1
PTS system IIA component, L-Asc family.
 
 
 0.984
SHF03293.1
PTS system IIC component, L-Asc family.
 
 
 0.978
SHF03238.1
PTS system IIA component, L-Asc family.
 
 
 0.944
SHF03314.1
Transcriptional antiterminator, BglG family.
 
 
 0.936
SHF13228.1
Transcriptional antiterminator, BglG family.
 
 
 0.842
SHF04789.1
Lichenan operon transcriptional antiterminator.
 
 
 0.840
SHE45564.1
L-ascorbate metabolism protein UlaG, beta-lactamase superfamily.
  
 
  0.769
SHE63863.1
Phosphocarrier protein.
    
  0.766
SHF13169.1
PTS system IIC component, Gat family.
  
 
 0.687
SHE33061.1
PTS system D-fructose-specific IIA component (F1P-forming), Frc family /PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.
  
 
 0.648
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.