Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE41670.1 | SHE41697.1 | SAMN05443638_102106 | SAMN05443638_102107 | Hypothetical protein. | Hypothetical protein. | 0.714 |
SHE41670.1 | SHE41755.1 | SAMN05443638_102106 | SAMN05443638_102109 | Hypothetical protein. | Hypothetical protein. | 0.617 |
SHE41670.1 | SHE41787.1 | SAMN05443638_102106 | SAMN05443638_102110 | Hypothetical protein. | Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.611 |
SHE41670.1 | lgt | SAMN05443638_102106 | SAMN05443638_102108 | Hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.638 |
SHE41697.1 | SHE41670.1 | SAMN05443638_102107 | SAMN05443638_102106 | Hypothetical protein. | Hypothetical protein. | 0.714 |
SHE41697.1 | SHE41755.1 | SAMN05443638_102107 | SAMN05443638_102109 | Hypothetical protein. | Hypothetical protein. | 0.708 |
SHE41697.1 | SHE41787.1 | SAMN05443638_102107 | SAMN05443638_102110 | Hypothetical protein. | Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.698 |
SHE41697.1 | lgt | SAMN05443638_102107 | SAMN05443638_102108 | Hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.708 |
SHE41755.1 | SHE41670.1 | SAMN05443638_102109 | SAMN05443638_102106 | Hypothetical protein. | Hypothetical protein. | 0.617 |
SHE41755.1 | SHE41697.1 | SAMN05443638_102109 | SAMN05443638_102107 | Hypothetical protein. | Hypothetical protein. | 0.708 |
SHE41755.1 | SHE41787.1 | SAMN05443638_102109 | SAMN05443638_102110 | Hypothetical protein. | Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | 0.840 |
SHE41755.1 | lgt | SAMN05443638_102109 | SAMN05443638_102108 | Hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.856 |
SHE41787.1 | SHE41670.1 | SAMN05443638_102110 | SAMN05443638_102106 | Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Hypothetical protein. | 0.611 |
SHE41787.1 | SHE41697.1 | SAMN05443638_102110 | SAMN05443638_102107 | Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Hypothetical protein. | 0.698 |
SHE41787.1 | SHE41755.1 | SAMN05443638_102110 | SAMN05443638_102109 | Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Hypothetical protein. | 0.840 |
SHE41787.1 | lgt | SAMN05443638_102110 | SAMN05443638_102108 | Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.840 |
SHE58063.1 | SHE65251.1 | SAMN05443638_105106 | SAMN05443638_1072 | Hypothetical protein. | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | 0.512 |
SHE58063.1 | SHE87850.1 | SAMN05443638_105106 | SAMN05443638_11564 | Hypothetical protein. | Protein translocase subunit yidC. | 0.798 |
SHE58063.1 | lgt | SAMN05443638_105106 | SAMN05443638_102108 | Hypothetical protein. | Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family. | 0.723 |
SHE65251.1 | SHE58063.1 | SAMN05443638_1072 | SAMN05443638_105106 | Tryptophan synthase, alpha chain; Belongs to the TrpA family. | Hypothetical protein. | 0.512 |
page 1 of 3