STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE41347.1Ubiquinone biosynthesis protein. (534 aa)    
Predicted Functional Partners:
SHE41320.1
Poly(hydroxyalkanoate) granule-associated protein.
 
     0.900
SHE58266.1
Exonuclease RecJ.
      0.619
SHE73604.1
Porphobilinogen synthase; Belongs to the ALAD family.
    
 0.591
hemA
glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).
    
 0.588
SHE85530.1
Hypothetical protein.
    
 0.586
SHE41167.1
Glycine C-acetyltransferase.
   
 0.550
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
 
   
  0.521
SHE50994.1
Methyltransferase domain-containing protein.
   
 
 0.514
SHE57468.1
Sulfatase.
   
 
 0.514
SHE76583.1
Methyltransferase domain-containing protein.
   
 
 0.514
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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