STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE47579.1Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase. (88 aa)    
Predicted Functional Partners:
SHE47621.1
Citrate lyase subunit beta / citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family.
 
 
 0.998
SHE47640.1
Citrate lyase subunit alpha / citrate CoA-transferase.
 
 
 0.998
SHE47671.1
[citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.
 
  
 0.991
SHE47695.1
holo-ACP synthase.
 
  
 0.987
SHE47715.1
triphosphoribosyl-dephospho-CoA synthase.
 
  
 0.987
SHE47550.1
Fumarate hydratase subunit beta.
       0.760
SHE47534.1
Fumarate hydratase subunit alpha.
       0.751
SHE47491.1
Methylaspartate ammonia-lyase.
 
     0.663
SHE47430.1
Conserved hypothetical protein.
 
     0.652
glmE
Glutamate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).
 
     0.623
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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