STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE51333.1Hypothetical protein. (167 aa)    
Predicted Functional Partners:
SHE51363.1
DnaJ domain-containing protein.
 
    0.952
SHE51378.1
Hypothetical protein.
 
     0.939
SHE82956.1
Hypothetical protein.
  
     0.630
SHE35810.1
Adenylate cyclase.
 
     0.562
SHE35766.1
Hypothetical protein.
 
     0.533
SHE92696.1
Transcriptional regulator, RpiR family.
  
     0.496
SHE51399.1
Hypothetical protein.
       0.473
SHE88033.1
Protein of unknown function.
  
     0.473
SHF14740.1
Site-specific recombinase XerD; Belongs to the 'phage' integrase family.
  
     0.468
SHE41670.1
Hypothetical protein.
  
     0.448
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.