Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SHE57568.1 | SHE57626.1 | SAMN05443638_10585 | SAMN05443638_10587 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FliS. | 0.997 |
| SHE57568.1 | SHE57675.1 | SAMN05443638_10585 | SAMN05443638_10589 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar protein FlaG. | 0.991 |
| SHE57568.1 | SHE57744.1 | SAMN05443638_10585 | SAMN05443638_10592 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 3 FlgL; Belongs to the bacterial flagellin family. | 0.989 |
| SHE57568.1 | SHE57763.1 | SAMN05443638_10585 | SAMN05443638_10593 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar hook-associated protein 1 FlgK. | 0.995 |
| SHE57568.1 | SHE57834.1 | SAMN05443638_10585 | SAMN05443638_10596 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar motor switch protein FliN/FliY. | 0.999 |
| SHE57568.1 | SHE57854.1 | SAMN05443638_10585 | SAMN05443638_10597 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar motor switch protein FliM. | 0.986 |
| SHE57568.1 | SHE57950.1 | SAMN05443638_10585 | SAMN05443638_105101 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.975 |
| SHE57568.1 | cheD | SAMN05443638_10585 | SAMN05443638_105104 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.825 |
| SHE57568.1 | csrA | SAMN05443638_10585 | SAMN05443638_10590 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.939 |
| SHE57568.1 | fliW | SAMN05443638_10585 | SAMN05443638_10591 | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.973 |
| SHE57626.1 | SHE57568.1 | SAMN05443638_10587 | SAMN05443638_10585 | Flagellar protein FliS. | Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.997 |
| SHE57626.1 | SHE57675.1 | SAMN05443638_10587 | SAMN05443638_10589 | Flagellar protein FliS. | Flagellar protein FlaG. | 0.990 |
| SHE57626.1 | SHE57744.1 | SAMN05443638_10587 | SAMN05443638_10592 | Flagellar protein FliS. | Flagellar hook-associated protein 3 FlgL; Belongs to the bacterial flagellin family. | 0.999 |
| SHE57626.1 | SHE57763.1 | SAMN05443638_10587 | SAMN05443638_10593 | Flagellar protein FliS. | Flagellar hook-associated protein 1 FlgK. | 0.999 |
| SHE57626.1 | SHE57834.1 | SAMN05443638_10587 | SAMN05443638_10596 | Flagellar protein FliS. | Flagellar motor switch protein FliN/FliY. | 0.999 |
| SHE57626.1 | SHE57854.1 | SAMN05443638_10587 | SAMN05443638_10597 | Flagellar protein FliS. | Flagellar motor switch protein FliM. | 0.986 |
| SHE57626.1 | SHE57950.1 | SAMN05443638_10587 | SAMN05443638_105101 | Flagellar protein FliS. | Two-component system, chemotaxis family, sensor kinase CheA. | 0.977 |
| SHE57626.1 | cheD | SAMN05443638_10587 | SAMN05443638_105104 | Flagellar protein FliS. | Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family. | 0.823 |
| SHE57626.1 | csrA | SAMN05443638_10587 | SAMN05443638_10590 | Flagellar protein FliS. | Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW. | 0.974 |
| SHE57626.1 | fliW | SAMN05443638_10587 | SAMN05443638_10591 | Flagellar protein FliS. | Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum. | 0.980 |
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