Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE36861.1 | SHE36884.1 | SAMN05443638_101221 | SAMN05443638_101222 | UDP-glucose 4-epimerase. | UDP-glucose pyrophosphorylase. | 0.904 |
SHE36861.1 | SHE75903.1 | SAMN05443638_101221 | SAMN05443638_11047 | UDP-glucose 4-epimerase. | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.822 |
SHE36861.1 | SHE83329.1 | SAMN05443638_101221 | SAMN05443638_11351 | UDP-glucose 4-epimerase. | Phosphoglucomutase. | 0.487 |
SHE36861.1 | galT | SAMN05443638_101221 | SAMN05443638_11048 | UDP-glucose 4-epimerase. | UTP-hexose-1-phosphate uridylyltransferase. | 0.879 |
SHE36884.1 | SHE36861.1 | SAMN05443638_101222 | SAMN05443638_101221 | UDP-glucose pyrophosphorylase. | UDP-glucose 4-epimerase. | 0.904 |
SHE36884.1 | SHE41187.1 | SAMN05443638_101222 | SAMN05443638_10287 | UDP-glucose pyrophosphorylase. | L-threonine 3-dehydrogenase. | 0.513 |
SHE36884.1 | SHE57172.1 | SAMN05443638_101222 | SAMN05443638_10569 | UDP-glucose pyrophosphorylase. | dTDP-glucose 4,6-dehydratase. | 0.830 |
SHE36884.1 | SHE75903.1 | SAMN05443638_101222 | SAMN05443638_11047 | UDP-glucose pyrophosphorylase. | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.963 |
SHE36884.1 | SHE83329.1 | SAMN05443638_101222 | SAMN05443638_11351 | UDP-glucose pyrophosphorylase. | Phosphoglucomutase. | 0.980 |
SHE36884.1 | galK | SAMN05443638_101222 | SAMN05443638_11046 | UDP-glucose pyrophosphorylase. | Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily. | 0.474 |
SHE36884.1 | galT | SAMN05443638_101222 | SAMN05443638_11048 | UDP-glucose pyrophosphorylase. | UTP-hexose-1-phosphate uridylyltransferase. | 0.921 |
SHE41187.1 | SHE36884.1 | SAMN05443638_10287 | SAMN05443638_101222 | L-threonine 3-dehydrogenase. | UDP-glucose pyrophosphorylase. | 0.513 |
SHE41187.1 | SHE75903.1 | SAMN05443638_10287 | SAMN05443638_11047 | L-threonine 3-dehydrogenase. | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.520 |
SHE41187.1 | SHE83329.1 | SAMN05443638_10287 | SAMN05443638_11351 | L-threonine 3-dehydrogenase. | Phosphoglucomutase. | 0.487 |
SHE41187.1 | galT | SAMN05443638_10287 | SAMN05443638_11048 | L-threonine 3-dehydrogenase. | UTP-hexose-1-phosphate uridylyltransferase. | 0.701 |
SHE57172.1 | SHE36884.1 | SAMN05443638_10569 | SAMN05443638_101222 | dTDP-glucose 4,6-dehydratase. | UDP-glucose pyrophosphorylase. | 0.830 |
SHE57172.1 | SHE75903.1 | SAMN05443638_10569 | SAMN05443638_11047 | dTDP-glucose 4,6-dehydratase. | UDP-galactose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. | 0.820 |
SHE57172.1 | SHE83329.1 | SAMN05443638_10569 | SAMN05443638_11351 | dTDP-glucose 4,6-dehydratase. | Phosphoglucomutase. | 0.575 |
SHE57172.1 | galT | SAMN05443638_10569 | SAMN05443638_11048 | dTDP-glucose 4,6-dehydratase. | UTP-hexose-1-phosphate uridylyltransferase. | 0.768 |
SHE73282.1 | SHE83329.1 | SAMN05443638_10956 | SAMN05443638_11351 | Transcriptional regulator, LacI family. | Phosphoglucomutase. | 0.468 |
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