STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE76326.1Protein of unknown function. (663 aa)    
Predicted Functional Partners:
SHE76350.1
Protein of unknown function.
 
   
 0.935
SHE76257.1
Energy-coupling factor transport system permease protein.
 
     0.888
SHE76299.1
Energy-coupling factor transport system substrate-specific component.
 
     0.875
SHE76284.1
Energy-coupling factor transport system ATP-binding protein.
 
     0.795
SHE37511.1
Hypothetical protein.
  
   
 0.724
SHE95610.1
Copper amine oxidase N-terminal domain-containing protein.
  
     0.689
SHE52926.1
Hypothetical protein.
  
     0.673
SHE76412.1
ABC-2 type transport system permease protein.
 
     0.661
SHE36690.1
Germination protein, Ger(x)C family.
  
     0.657
SHE48992.1
Response regulator receiver domain-containing protein.
  
   
 0.617
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.