STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE80767.1Spore coat assemly protein. (288 aa)    
Predicted Functional Partners:
SHE80708.1
Spore coat protein, CotS family.
 
  
 0.691
SHE88945.1
Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.
  
   
 0.674
SHE94794.1
Stage III sporulation protein AE.
  
   
 0.632
SHE80791.1
Uncharacterized protein Veg.
       0.631
SHE94816.1
Stage III sporulation protein AD.
  
     0.571
SHE40458.1
Uncharacterized membrane protein YkvI.
  
     0.566
SHE42871.1
Sporulation protein YabP.
  
   
 0.546
SHE80683.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.538
SHE94744.1
Stage III sporulation protein AG.
  
     0.535
SHE82976.1
Putative sporulation protein YtxC.
  
     0.529
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.