STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHE95642.1Hypothetical protein. (364 aa)    
Predicted Functional Partners:
SHE53590.1
Sporulation protein YunB.
  
     0.615
SHE49226.1
Glycine radical enzyme, YjjI family.
  
 
  0.559
adk
Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.
     
 0.544
SHE35538.1
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase.
     
 0.543
SHE95658.1
Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.
       0.496
SHE48725.1
Ferrous iron transport protein A.
  
     0.485
SHE80919.1
Stage II sporulation protein R.
  
     0.457
SHE41975.1
Ribonucleoside-triphosphate reductase class III catalytic subunit.
   
 
  0.449
SHE78125.1
Ribonucleoside-diphosphate reductase alpha chain/ribonucleoside-triphosphate reductase.
   
 
  0.449
SHE36711.1
Spore germination protein.
  
     0.436
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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