STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF01072.1Hypothetical protein. (244 aa)    
Predicted Functional Partners:
SHF01032.1
Thiazole/oxazole-forming peptide maturase, SagD family component.
     
 0.887
SHF01048.1
CAAX protease self-immunity.
     
 0.887
SHF00989.1
Thiazole/oxazole-forming peptide maturase, SagC family component.
     
 0.867
SHF00969.1
SagB-type dehydrogenase domain-containing protein.
     
 0.852
SHF01110.1
ABC-2 type transport system permease protein.
       0.768
SHF01092.1
ABC-2 type transport system ATP-binding protein.
       0.760
SHF01129.1
ABC-2 type transport system permease protein.
       0.740
SHF00945.1
Streptolysin S associated protein.
       0.473
SHF01153.1
Trk system potassium uptake protein TrkA.
       0.406
SHF01173.1
Trk system potassium uptake protein TrkH.
       0.406
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.