Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHE39198.1 | SHF03085.1 | SAMN05443638_1025 | SAMN05443638_1267 | Acetyltransferase (GNAT) family protein. | Major Facilitator Superfamily protein. | 0.570 |
SHE42677.1 | SHE54447.1 | SAMN05443638_102145 | SAMN05443638_104147 | Histidine decarboxylase. | Hypothetical protein. | 0.585 |
SHE42677.1 | SHF03085.1 | SAMN05443638_102145 | SAMN05443638_1267 | Histidine decarboxylase. | Major Facilitator Superfamily protein. | 0.651 |
SHE48478.1 | SHF03085.1 | SAMN05443638_103145 | SAMN05443638_1267 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.508 |
SHE54447.1 | SHE42677.1 | SAMN05443638_104147 | SAMN05443638_102145 | Hypothetical protein. | Histidine decarboxylase. | 0.585 |
SHE54447.1 | SHF00269.1 | SAMN05443638_104147 | SAMN05443638_12340 | Hypothetical protein. | Hypothetical protein. | 0.538 |
SHE54447.1 | SHF03085.1 | SAMN05443638_104147 | SAMN05443638_1267 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.700 |
SHE69354.1 | SHE69378.1 | SAMN05443638_10821 | SAMN05443638_10822 | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.999 |
SHE69354.1 | SHF03085.1 | SAMN05443638_10821 | SAMN05443638_1267 | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | Major Facilitator Superfamily protein. | 0.438 |
SHE69378.1 | SHE69354.1 | SAMN05443638_10822 | SAMN05443638_10821 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.999 |
SHE69378.1 | SHF03085.1 | SAMN05443638_10822 | SAMN05443638_1267 | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | Major Facilitator Superfamily protein. | 0.439 |
SHF00269.1 | SHE54447.1 | SAMN05443638_12340 | SAMN05443638_104147 | Hypothetical protein. | Hypothetical protein. | 0.538 |
SHF00269.1 | SHF03085.1 | SAMN05443638_12340 | SAMN05443638_1267 | Hypothetical protein. | Major Facilitator Superfamily protein. | 0.556 |
SHF03085.1 | SHE39198.1 | SAMN05443638_1267 | SAMN05443638_1025 | Major Facilitator Superfamily protein. | Acetyltransferase (GNAT) family protein. | 0.570 |
SHF03085.1 | SHE42677.1 | SAMN05443638_1267 | SAMN05443638_102145 | Major Facilitator Superfamily protein. | Histidine decarboxylase. | 0.651 |
SHF03085.1 | SHE48478.1 | SAMN05443638_1267 | SAMN05443638_103145 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.508 |
SHF03085.1 | SHE54447.1 | SAMN05443638_1267 | SAMN05443638_104147 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.700 |
SHF03085.1 | SHE69354.1 | SAMN05443638_1267 | SAMN05443638_10821 | Major Facilitator Superfamily protein. | Ribonucleoside-diphosphate reductase beta chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family. | 0.438 |
SHF03085.1 | SHE69378.1 | SAMN05443638_1267 | SAMN05443638_10822 | Major Facilitator Superfamily protein. | Ribonucleoside-diphosphate reductase alpha chain; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides. | 0.439 |
SHF03085.1 | SHF00269.1 | SAMN05443638_1267 | SAMN05443638_12340 | Major Facilitator Superfamily protein. | Hypothetical protein. | 0.556 |
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