STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF05687.1Uncharacterized conserved protein YlxW, UPF0749 family. (241 aa)    
Predicted Functional Partners:
SHF05710.1
Small basic protein.
 
  
 0.981
SHF05741.1
Uncharacterized conserved protein YlxW, UPF0749 family.
 
    
0.883
SHF05760.1
Cell division protein FtsQ; Essential cell division protein.
  
    0.851
sepF
Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.
 
     0.770
SHF05664.1
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.723
SHF05599.1
RNA-binding protein YlmH, contains S4-like domain.
       0.709
SHF05621.1
YggT family protein.
       0.709
SHF05581.1
Cell division initiation protein.
       0.698
SHF05779.1
Cell division protein FtsW; Belongs to the SEDS family.
       0.646
SHF05514.1
Transcriptional regulator, TraR/DksA family.
 
    0.623
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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