STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHF13698.1Hypothetical protein. (166 aa)    
Predicted Functional Partners:
SHF13743.1
Two-component system, OmpR family, sensor histidine kinase ArlS.
     
 0.669
SHE56908.1
Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.
    
   0.642
SHE57763.1
Flagellar hook-associated protein 1 FlgK.
    
   0.642
SHE57854.1
Flagellar motor switch protein FliM.
    
   0.642
SHF13721.1
DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain.
  
  
 0.585
SHE42345.1
Putative hemolysin.
   
    0.504
SHE66880.1
CBS domain-containing protein.
   
    0.504
SHE56496.1
Flagellar basal-body rod protein FlgG.
    
   0.424
SHE56516.1
Flagellar basal-body rod protein FlgG.
    
   0.424
SHF13675.1
Hypothetical protein.
       0.410
Your Current Organism:
Clostridium fallax
NCBI taxonomy Id: 1533
Other names: ATCC 19400, BCRC 14512, Bacillus fallax, C. fallax, CCRC 14512, CCRC:14512, CCUG 4853, DSM 2631, NCIMB 10634, NCTC 8380, VPI 5729, Vallorillus fallax
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.