STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
astDSuccinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. (489 aa)    
Predicted Functional Partners:
argD
KEGG: argD, bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.
 
 0.958
KGJ87838.1
KEGG: astA, arginine N-succinyltransferase.
 
  
 0.939
astE
Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.
 
 
  0.934
astB
N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).
 
  
 0.798
KGJ89211.1
Hypothetical protein; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
 
0.772
KGJ99299.1
KEGG: gltB, glutamate synthase subunit alpha.
  
 
 0.756
KGJ98722.1
2-oxoglutarate synthase; KEGG: pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein.
   
 0.725
KGJ98721.1
Glutamate synthase (NADPH); KEGG: 4Fe-4S ferredoxin.
  
 0.710
KGJ99619.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.709
KGJ89389.1
Hypothetical protein; KEGG: 2-oxoisovalerate dehydrogenase E1 subunits alpha/beta.
  
 0.701
Your Current Organism:
Thalassotalea sp. ND16A
NCBI taxonomy Id: 1535422
Other names: T. sp. ND16A
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